Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009847.1 Corchorus capsularis cultivar CVL-1 contig09868, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73681

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
734--788
29
1.9
28
85
3
74
49
9
18
23
1.76
1305--1357
26
2.0
26
96
0
97
39
16
16
26
1.91
17213--17266
27
2.0
27
88
0
81
27
12
18
40
1.87
22193--22223
16
1.9
16
93
0
53
19
19
41
19
1.90
24162--24216
29
1.9
29
85
3
76
49
10
16
23
1.77
31003--31187
84
2.2
81
81
4
219
36
21
14
28
1.92
36808--36864
27
2.0
28
86
6
80
33
3
15
47
1.63
36804--36880
29
2.6
29
76
14
77
38
3
11
45
1.59
48882--48983
53
1.9
54
89
2
161
30
9
17
42
1.82
53842--53927
33
2.6
35
80
12
110
33
4
9
52
1.54
56301--56351
13
4.0
13
84
2
68
66
13
19
0
1.24
56305--56364
26
2.5
23
89
8
84
65
13
21
0
1.27
73262--73365
56
1.9
52
88
7
154
40
11
14
33
1.82

Tables:   1

The End!