Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009860.1 Corchorus capsularis cultivar CVL-1 contig09881, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13674

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
416--641
118
1.9
118
90
1
364
34
17
19
29
1.94
536--2304
323
5.5
321
89
3
2605
35
16
14
32
1.90
7571--7618
15
3.2
15
77
11
62
52
2
39
6
1.39
7682--7723
15
2.8
16
78
7
52
42
2
30
23
1.67
10306--10433
48
2.7
48
80
2
132
24
26
17
31
1.97
12792--12816
7
3.6
7
100
0
50
60
12
0
28
1.32
13115--13207
45
2.1
44
87
2
132
32
10
20
36
1.87

Tables:   1

The End!