Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009862.1 Corchorus capsularis cultivar CVL-1 contig09883, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24439

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2605--2654
27
1.9
26
88
8
75
66
12
0
22
1.24
3162--3473
169
1.9
164
87
4
464
35
12
9
41
1.76
4974--5032
30
2.0
30
89
0
91
44
16
3
35
1.65
5057--5082
2
13.0
2
100
0
52
50
0
0
50
1.00
5895--5962
30
2.2
31
85
12
88
27
13
11
47
1.78
6148--6183
18
2.0
18
88
0
54
41
8
8
41
1.65
6332--6431
50
2.0
51
88
2
148
50
7
21
22
1.72
6535--6602
12
6.2
11
82
12
79
0
35
1
63
1.04
6542--6594
7
7.3
7
76
6
52
0
35
1
62
1.06
6533--6601
22
3.1
22
82
12
79
0
34
1
63
1.03
8170--8195
2
13.0
2
100
0
52
50
0
0
50
1.00
9442--9491
26
1.9
26
100
0
100
28
2
28
42
1.67
10212--10250
20
2.0
20
94
0
69
43
17
15
23
1.87
17148--17186
15
2.6
15
91
0
60
41
48
5
5
1.47
17188--17224
18
2.1
18
94
0
65
51
40
0
8
1.32

Tables:   1

The End!