Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009863.1 Corchorus capsularis cultivar CVL-1 contig09884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42384

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1941--1996
22
2.5
22
100
0
112
41
33
0
25
1.56
16192--16228
19
1.9
19
88
0
56
56
5
18
18
1.60
17346--17381
8
4.5
8
100
0
72
47
0
13
38
1.44
24006--24208
100
2.0
101
95
1
363
28
19
14
37
1.91
24580--24625
20
2.2
21
92
3
76
23
6
17
52
1.68
31583--31614
11
2.9
11
90
0
55
37
0
18
43
1.51
37277--37339
15
4.4
15
75
18
55
36
4
1
57
1.30
37889--37932
21
2.1
21
100
0
88
54
0
0
45
0.99
41207--42241
439
2.4
436
86
2
1373
42
16
13
27
1.85

Tables:   1

The End!