Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009864.1 Corchorus capsularis cultivar CVL-1 contig09885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6651

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--126
44
2.2
44
94
0
171
17
31
31
20
1.95
553--583
16
1.9
16
93
0
53
0
41
0
58
0.98
1022--1141
59
2.1
56
85
4
159
28
2
19
50
1.61
2224--2268
15
3.0
15
86
0
63
33
31
17
17
1.94
6157--6216
31
1.9
31
90
6
95
31
18
3
46
1.65
6525--6567
19
2.1
21
84
16
56
27
6
2
62
1.33

Tables:   1

The End!