Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009866.1 Corchorus capsularis cultivar CVL-1 contig09887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13213

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--51
6
5.3
6
96
3
55
70
0
0
29
0.87
15--72
14
4.4
14
81
16
61
68
0
0
31
0.89
21--81
25
2.3
26
74
20
56
67
0
0
32
0.91
1394--1432
20
2.0
20
85
5
53
25
12
33
28
1.93
4808--4836
6
4.8
6
100
0
58
17
13
0
68
1.20
6809--6864
3
18.7
3
100
0
112
66
0
0
33
0.92
8944--9050
33
3.2
33
94
0
187
43
17
10
28
1.82
9042--9128
33
2.7
32
82
10
97
41
21
8
28
1.82
10900--10962
30
2.1
30
88
5
92
22
34
14
28
1.93
11337--11445
33
3.3
33
94
0
191
44
17
11
27
1.82
11337--11478
66
2.2
66
83
2
169
42
18
10
28
1.83
11438--11575
33
4.2
33
82
7
129
42
21
9
26
1.83
13067--13095
5
6.0
5
92
8
51
17
0
0
82
0.66

Tables:   1

The End!