Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009868.1 Corchorus capsularis cultivar CVL-1 contig09889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42399

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15223--15265
1
43.0
1
100
0
86
100
0
0
0
0.00
16346--16378
2
16.5
2
100
0
66
51
0
48
0
1.00
18292--18337
21
2.2
21
84
0
56
23
21
32
21
1.98
32128--32209
42
2.0
42
95
0
146
24
24
14
36
1.93
32445--32486
7
6.1
7
97
2
77
57
11
0
30
1.35
35421--35458
16
2.4
16
91
8
60
81
2
15
0
0.80
39276--39316
20
2.0
21
90
4
66
34
7
19
39
1.80

Tables:   1

The End!