Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009870.1 Corchorus capsularis cultivar CVL-1 contig09891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14505

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3033--3139
53
2.0
53
90
0
169
40
10
7
42
1.67
3187--3224
19
2.0
19
94
0
67
5
21
13
60
1.52
3841--3893
26
2.1
25
82
10
63
47
11
5
35
1.63
8373--8449
16
4.8
16
77
0
82
54
0
3
41
1.19
8373--8426
19
3.0
19
76
7
60
57
0
1
40
1.09
9292--9350
22
2.7
22
86
5
75
45
10
6
37
1.65
12107--12140
17
2.0
17
100
0
68
23
35
11
29
1.90
13061--13131
37
1.9
37
94
0
124
38
22
12
26
1.90
13329--13668
185
1.8
185
92
0
572
36
17
15
31
1.91

Tables:   1

The End!