Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009877.1 Corchorus capsularis cultivar CVL-1 contig09898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17478

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9349--9385
17
2.1
18
95
5
67
27
10
35
27
1.90
12346--12414
33
2.1
33
94
0
120
33
18
23
24
1.97
14065--14267
56
3.7
54
79
6
210
25
18
7
48
1.74
14086--14273
56
3.3
56
82
5
211
23
18
5
51
1.68
14344--14474
50
2.6
51
84
4
167
26
17
7
48
1.74
14466--14674
35
5.8
36
77
11
187
32
16
9
41
1.80
14476--14688
69
3.0
69
83
6
248
31
16
9
41
1.81
16774--16906
44
3.0
45
91
3
216
25
20
18
35
1.95
17144--17178
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!