Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009879.1 Corchorus capsularis cultivar CVL-1 contig09900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17232

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1339--1388
21
2.3
22
76
13
59
20
10
10
60
1.57
5514--5547
15
2.3
15
100
0
68
44
5
5
44
1.52
7221--7249
1
29.0
1
100
0
58
0
0
0
100
0.00
9882--9920
19
2.0
20
85
14
55
38
2
2
56
1.27
10679--10847
86
2.0
86
97
0
320
34
10
14
40
1.80
11328--11364
19
1.9
19
100
0
74
54
10
8
27
1.63
11689--11726
18
2.1
18
100
0
76
34
26
10
28
1.90

Tables:   1

The End!