Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009882.1 Corchorus capsularis cultivar CVL-1 contig09903, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15947

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
127--156
2
15.0
2
100
0
60
50
0
0
50
1.00
3397--3433
18
2.1
17
90
5
56
67
8
0
24
1.17
7606--7639
1
34.0
1
100
0
68
0
0
0
100
0.00
7716--7757
18
2.3
18
100
0
84
26
4
4
64
1.33
7943--8006
15
4.3
15
78
4
58
56
6
1
35
1.34
8828--8883
27
2.1
27
96
0
103
60
0
5
33
1.19
10806--10834
13
2.2
13
100
0
58
62
0
6
31
1.22
11440--11541
33
3.0
33
88
8
152
35
17
17
29
1.93
11742--11772
16
1.9
16
93
0
53
19
6
19
54
1.65
13330--13376
19
2.4
19
82
3
58
44
14
21
19
1.86
15573--15650
6
12.3
6
71
28
56
32
48
15
3
1.63
15573--15646
16
4.6
16
76
6
60
31
48
16
4
1.64

Tables:   1

The End!