Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009885.1 Corchorus capsularis cultivar CVL-1 contig09906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29676

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3268--3310
12
3.5
12
93
6
77
34
16
23
25
1.95
11869--12526
329
2.0
329
97
0
1246
25
17
13
43
1.86
12628--12733
53
2.0
53
96
1
194
54
9
10
25
1.64
12632--12743
54
2.1
53
91
5
181
53
10
9
25
1.66
14114--14146
2
16.5
2
100
0
66
48
0
0
51
1.00
16097--16130
11
3.1
11
91
0
50
8
35
14
41
1.77
20784--20848
31
2.1
31
94
0
112
43
21
15
20
1.88
20977--21014
19
2.0
19
94
0
67
65
10
23
0
1.23
21622--21697
30
2.5
32
72
10
77
21
28
13
36
1.91
23107--23188
29
2.8
30
83
9
107
42
7
24
25
1.80

Tables:   1

The End!