Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009888.1 Corchorus capsularis cultivar CVL-1 contig09909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72766

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
579--619
21
2.0
20
85
9
55
51
17
9
21
1.74
3165--3189
12
2.1
12
100
0
50
32
0
60
8
1.26
36572--36604
8
4.1
8
100
0
66
87
12
0
0
0.53
43713--43770
27
2.1
27
96
0
107
43
12
17
27
1.84
45421--45499
41
1.9
41
92
5
133
27
11
16
44
1.82
46342--46527
93
2.0
93
92
3
311
31
13
22
31
1.93
47126--47168
23
1.9
22
85
4
59
16
23
4
55
1.59
58561--58590
16
1.9
16
93
6
53
0
20
0
80
0.72
71071--71149
29
2.7
29
88
4
104
16
25
17
40
1.90
71300--71371
29
2.4
29
88
6
110
37
18
27
16
1.92
72741--72766
1
26.0
1
100
0
52
100
0
0
0
0.00

Tables:   1

The End!