Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009889.1 Corchorus capsularis cultivar CVL-1 contig09910, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19454

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3253--3390
41
3.2
41
66
26
113
7
39
4
48
1.52
3251--3428
89
2.0
89
100
0
356
10
39
4
46
1.58
5374--5399
12
2.2
12
100
0
52
15
26
0
57
1.38
8122--8161
20
2.0
20
90
0
62
32
12
12
42
1.80
10318--10360
16
2.8
15
79
6
50
79
4
11
4
1.04
11452--11495
21
2.1
21
86
0
61
36
13
27
22
1.92
11459--11505
21
2.3
20
85
7
60
25
17
34
23
1.96
15335--15395
28
2.2
27
79
2
68
54
9
0
36
1.34
18903--18936
17
2.1
17
88
5
52
55
0
2
41
1.15

Tables:   1

The End!