Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009892.1 Corchorus capsularis cultivar CVL-1 contig09913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32687

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1704--1736
4
8.0
4
96
3
57
24
0
3
72
0.98
16324--16434
38
3.0
38
84
12
160
29
23
12
34
1.92
17881--17977
33
2.8
34
89
7
135
29
19
18
31
1.96
18010--18072
33
1.9
32
93
3
108
49
1
30
19
1.58
22977--23018
17
2.6
16
88
7
59
52
0
40
7
1.29
29518--29585
30
2.3
30
89
0
100
32
11
23
32
1.91
32542--32570
4
7.2
4
100
0
58
51
24
0
24
1.48
32572--32601
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!