Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009899.1 Corchorus capsularis cultivar CVL-1 contig09920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75802

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3906--3934
15
1.9
15
100
0
58
34
0
20
44
1.52
8344--8388
23
2.0
23
86
8
65
35
8
0
55
1.31
12633--12746
59
1.9
59
98
0
219
26
21
22
29
1.99
19604--19639
3
11.7
3
94
5
63
33
63
0
2
1.08
29261--29328
29
2.3
28
80
9
82
44
17
19
19
1.88
30166--30308
73
2.0
73
94
0
250
34
14
15
35
1.88
38199--38232
16
2.1
16
100
0
68
17
26
23
32
1.97
53026--53291
135
2.0
131
84
8
342
33
16
16
33
1.92
59633--59660
14
2.0
14
100
0
56
50
28
7
14
1.69
74017--74079
30
2.1
30
81
0
72
41
7
23
26
1.82
74582--74606
3
8.3
3
100
0
50
32
0
0
68
0.90
75753--75802
2
25.5
2
95
4
93
50
0
0
50
1.00

Tables:   1

The End!