Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009900.1 Corchorus capsularis cultivar CVL-1 contig09921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21276

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--32
2
14.0
2
100
0
56
50
0
0
50
1.00
62--436
189
2.0
188
91
4
612
39
5
9
45
1.60
1692--2082
211
1.9
209
88
6
603
34
9
9
46
1.70
3750--3833
31
2.8
29
85
5
105
29
13
11
45
1.79
4058--4097
21
1.9
21
85
10
55
25
37
10
27
1.88
7847--7880
2
17.0
2
93
0
59
47
0
0
52
1.00
9109--9147
20
1.9
20
84
5
51
53
10
5
30
1.56
9007--9139
59
2.3
59
91
0
221
48
5
12
33
1.64
9850--9883
17
2.0
17
94
0
59
26
11
20
41
1.87
10108--10950
429
2.0
428
97
0
1605
37
11
13
37
1.82
10976--11056
29
2.8
29
84
1
81
23
27
9
39
1.86
10996--11056
30
2.1
29
90
3
95
26
29
6
37
1.81
13523--13793
135
2.0
135
99
0
533
22
25
12
39
1.90
15943--16293
173
2.0
173
98
0
684
41
10
22
25
1.86
20410--20447
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!