Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009903.1 Corchorus capsularis cultivar CVL-1 contig09924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34133

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5550--5583
16
2.1
16
100
0
68
58
0
5
35
1.22
14230--14278
24
2.0
24
100
0
98
14
24
12
48
1.77
16807--16836
15
2.1
14
93
6
51
16
0
0
83
0.65
17677--17713
17
2.1
17
90
5
56
83
0
16
0
0.64
25521--25550
15
2.0
15
93
0
51
20
10
26
43
1.83
32362--32444
25
3.3
25
93
0
139
31
28
22
16
1.96
32362--32457
50
1.9
50
89
0
147
31
27
22
18
1.97
33289--33333
21
2.1
21
87
0
63
57
2
6
33
1.37

Tables:   1

The End!