Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009928.1 Corchorus capsularis cultivar CVL-1 contig09949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32421

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2646--2671
3
8.7
3
100
0
52
34
0
0
65
0.93
4117--4180
27
2.3
27
77
17
69
39
9
3
48
1.51
8968--8994
13
2.1
13
100
0
54
7
29
0
62
1.22
9058--9091
5
7.0
5
96
3
61
41
17
0
41
1.50
9860--9889
2
15.0
2
100
0
60
50
0
0
50
1.00
13010--13069
22
2.7
22
94
0
102
26
5
23
45
1.73
13194--13238
2
24.0
2
78
13
51
51
0
0
48
1.00
15184--15216
7
4.9
7
96
3
59
27
45
0
27
1.54
31188--31270
40
2.1
40
88
4
123
27
20
10
40
1.86
31223--32421
330
3.6
330
84
5
1521
33
13
15
37
1.87

Tables:   1

The End!