Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000993.1 Corchorus capsularis cultivar CVL-1 contig00993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2864

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1136--1196
31
2.0
30
87
9
88
29
16
4
49
1.66
1136--1206
32
2.2
32
85
5
90
32
14
4
49
1.62
1510--1774
130
2.0
132
95
2
480
39
9
11
39
1.73
2439--2520
42
2.0
42
82
4
103
13
25
45
15
1.83
2621--2694
22
3.5
22
70
17
68
55
5
0
39
1.23
2631--2663
14
2.3
15
89
5
50
51
6
0
42
1.26
2616--2695
44
1.9
40
87
10
115
53
5
0
41
1.22

Tables:   1

The End!