Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009933.1 Corchorus capsularis cultivar CVL-1 contig09954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10894

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--675
332
2.0
330
83
4
819
35
14
15
35
1.88
509--840
165
2.0
165
91
1
531
28
19
16
35
1.93
682--1423
332
2.2
330
81
3
846
32
15
15
36
1.89
951--1835
472
1.9
471
84
3
1179
32
15
16
35
1.90
1423--3687
332
6.8
332
83
3
2789
33
14
15
35
1.89
1423--3687
663
3.4
657
83
3
2854
33
14
15
35
1.89
4006--4631
318
2.0
316
82
5
764
32
14
16
36
1.90
6565--10752
332
12.7
327
86
4
4744
33
14
16
35
1.89
7797--10719
663
4.4
661
90
2
4375
32
14
16
35
1.90

Tables:   1

The End!