Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009936.1 Corchorus capsularis cultivar CVL-1 contig09957, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30652

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1703--1733
2
16.0
2
93
6
55
51
0
0
48
1.00
4551--4575
13
1.9
13
100
0
50
8
12
0
80
0.92
7356--7450
31
3.1
31
81
0
91
35
23
21
20
1.96
15906--15986
39
2.1
39
100
0
162
29
7
33
29
1.85
20249--20342
30
3.0
30
80
12
93
28
15
19
36
1.93
28008--28035
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!