Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009937.1 Corchorus capsularis cultivar CVL-1 contig09958, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47959

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8122--8147
7
3.7
7
100
0
52
11
0
0
88
0.52
16195--16250
27
2.1
27
100
0
112
25
17
14
42
1.87
20102--20130
2
14.5
2
100
0
58
48
0
0
51
1.00
22492--22613
59
2.1
59
98
0
235
25
26
21
27
1.99
31669--31698
15
2.0
15
93
0
51
10
10
6
73
1.25
34264--34311
24
2.0
24
84
8
62
45
4
6
43
1.48
34466--34500
17
2.1
17
88
0
52
80
0
2
17
0.84
41701--41778
29
2.7
29
81
2
93
43
16
23
16
1.87
46232--46276
21
2.1
22
83
4
56
17
35
8
37
1.81

Tables:   1

The End!