Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000994.1 Corchorus capsularis cultivar CVL-1 contig00994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1573

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1034--1220
48
3.8
48
87
5
239
51
6
17
24
1.69
1229--1294
31
2.1
31
88
8
98
48
6
19
25
1.72
1371--1473
7
14.6
7
66
13
50
55
1
22
20
1.53
1372--1466
50
1.9
50
80
8
113
55
2
21
21
1.53
1391--1519
35
3.6
35
86
5
152
54
2
24
19
1.56
1491--1541
23
2.2
23
82
6
59
56
3
21
17
1.57

Tables:   1

The End!