Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009942.1 Corchorus capsularis cultivar CVL-1 contig09963, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38268

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3533--3559
3
9.0
3
100
0
54
66
0
0
33
0.92
3748--3773
4
6.5
4
100
0
52
23
0
0
76
0.78
19453--19479
2
13.5
2
100
0
54
0
51
0
48
1.00
25703--25928
118
1.9
117
87
6
332
30
7
25
37
1.82
32486--32796
156
2.0
156
93
2
536
27
14
15
42
1.86
33147--33176
5
5.8
5
96
4
51
16
0
0
83
0.65
33419--33449
2
15.5
2
100
0
62
48
0
0
51
1.00
35256--36684
26
55.1
26
86
5
1820
29
14
24
31
1.95
36738--37011
50
5.5
50
87
0
395
34
21
34
9
1.87
37191--37221
16
1.9
16
100
0
62
25
19
9
45
1.81
37322--37363
18
2.4
18
92
4
68
0
0
11
88
0.53
37322--37361
10
4.2
10
84
12
57
0
0
12
87
0.54
37325--37363
15
2.6
16
88
8
55
0
0
10
89
0.48

Tables:   1

The End!