Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009949.1 Corchorus capsularis cultivar CVL-1 contig09970, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34342

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1138--1172
2
17.5
2
100
0
70
48
0
0
51
1.00
3661--3702
7
6.0
7
88
0
66
28
38
2
30
1.70
5164--5222
31
1.9
31
93
6
102
33
15
15
35
1.89
6314--6348
2
18.5
2
88
11
56
51
0
0
48
1.00
6670--6696
13
2.1
13
100
0
54
14
29
7
48
1.71
11925--11995
27
2.6
27
80
10
83
30
22
15
30
1.95
18679--18717
19
2.1
19
100
0
78
15
5
10
69
1.34
18684--18725
19
2.2
19
91
0
66
19
4
11
64
1.44
20144--20526
203
1.9
192
85
6
516
40
16
11
30
1.84
28164--28555
194
2.0
194
90
1
624
25
16
21
35
1.95

Tables:   1

The End!