Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009951.1 Corchorus capsularis cultivar CVL-1 contig09972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22628

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
954--1018
31
2.1
31
94
0
112
35
13
26
24
1.93
4380--4563
92
2.0
92
94
0
323
41
13
15
29
1.85
9479--9509
14
2.2
14
94
0
53
38
0
12
48
1.42
9521--9565
19
2.4
19
96
3
83
35
0
31
33
1.58
11289--11324
5
7.6
5
87
12
58
22
19
0
58
1.40
11438--11670
70
3.2
70
84
10
306
37
12
0
49
1.45
11438--11676
78
3.2
77
90
7
359
37
12
0
49
1.44
12517--12582
17
4.0
15
77
15
60
40
3
1
54
1.25
12917--13924
331
3.0
328
77
10
1024
33
14
15
36
1.88
13950--14481
22
24.5
22
77
8
414
33
15
13
37
1.87
14032--14354
87
3.7
86
74
12
234
33
15
13
36
1.87
14273--14477
86
2.4
87
81
8
224
34
17
11
37
1.85
14536--16008
332
4.4
329
82
7
1472
33
13
15
37
1.87
20268--20297
2
15.5
2
93
6
53
46
0
0
53
1.00
21096--21126
15
2.1
15
100
0
62
19
19
38
22
1.93

Tables:   1

The End!