Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009952.1 Corchorus capsularis cultivar CVL-1 contig09973, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2439

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
383--413
2
16.0
2
93
6
55
51
0
0
48
1.00
722--746
6
4.2
6
100
0
50
16
16
16
52
1.76
1193--1517
35
9.3
35
84
6
367
36
18
17
26
1.93
1193--1517
69
4.7
70
85
3
415
36
18
17
26
1.93
1243--1517
104
2.6
105
87
2
412
37
18
18
25
1.93
1193--1517
139
2.3
139
84
5
458
36
18
17
26
1.93
1471--1753
35
8.0
35
88
6
410
32
22
15
28
1.95
1222--1739
104
4.9
104
82
8
357
35
20
16
27
1.94
1471--1746
109
2.6
104
88
7
412
31
23
15
29
1.95
1471--1746
144
1.9
142
91
4
448
31
23
15
29
1.95

Tables:   1

The End!