Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009956.1 Corchorus capsularis cultivar CVL-1 contig09977, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20848

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
842--889
24
2.0
24
91
0
78
31
31
14
22
1.94
4193--4218
2
13.0
2
100
0
52
50
0
0
50
1.00
10511--10535
5
5.0
5
100
0
50
60
0
40
0
0.97
19130--19191
29
2.1
30
87
3
90
30
16
19
33
1.94
19171--19210
19
2.0
20
95
4
73
30
22
20
27
1.98
19142--19241
49
2.0
49
100
0
200
30
19
18
33
1.95
19249--19312
32
2.0
32
100
0
128
34
15
12
37
1.85

Tables:   1

The End!