Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009957.1 Corchorus capsularis cultivar CVL-1 contig09978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10589

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
48
0
0
51
1.00
3377--3953
285
2.0
285
99
0
1145
25
18
16
39
1.91
9804--9916
42
2.7
42
84
0
136
23
20
29
27
1.99
9844--9941
42
2.3
42
87
5
133
24
20
27
27
1.99
9996--10032
18
2.1
18
100
0
74
37
10
16
35
1.83
10516--10549
17
2.0
17
94
0
59
8
32
41
17
1.80

Tables:   1

The End!