Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009958.1 Corchorus capsularis cultivar CVL-1 contig09979, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13296

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--111
39
2.3
39
98
0
171
10
38
37
13
1.78
129--156
13
2.2
13
100
0
56
0
14
0
85
0.59
140--213
26
2.6
27
77
18
80
2
16
4
77
1.04
127--216
6
14.8
6
72
13
51
2
16
3
77
1.00
175--215
22
2.0
20
90
9
64
0
14
2
82
0.76
137--216
10
7.3
10
75
17
70
2
15
3
78
0.99
4377--4660
144
2.0
144
92
1
471
37
14
17
30
1.89
5543--5590
22
2.2
22
100
0
96
43
0
12
43
1.42
7266--7443
93
1.9
92
94
1
311
41
16
14
28
1.87
11409--11435
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!