Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009960.1 Corchorus capsularis cultivar CVL-1 contig09981, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22791

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1198--1438
61
4.0
60
78
9
240
26
4
26
41
1.76
1198--1401
61
3.4
59
83
6
250
25
4
26
43
1.73
3156--3262
51
2.1
51
91
0
178
31
16
12
39
1.86
3950--3994
21
2.1
21
87
0
63
13
33
8
44
1.75
4245--4306
11
4.7
14
69
27
55
32
1
9
56
1.41
4245--4312
26
2.6
26
86
9
102
33
1
10
54
1.43
4321--4377
22
2.5
23
86
8
73
42
0
19
38
1.51
6751--6795
18
2.5
19
85
10
67
0
22
57
20
1.40
14409--16599
337
6.7
325
78
9
1862
36
16
13
34
1.88
18716--20533
340
5.5
324
76
9
1622
35
16
14
33
1.89

Tables:   1

The End!