Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009961.1 Corchorus capsularis cultivar CVL-1 contig09982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5937

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3064--3119
2
28.0
2
82
7
69
42
5
0
51
1.24
3064--3119
25
2.2
25
87
0
76
42
5
0
51
1.24
3521--3558
19
2.0
20
85
15
53
28
5
2
63
1.30
3661--3748
22
3.9
22
75
11
72
31
9
19
39
1.83
3788--3918
22
6.0
22
71
11
81
35
8
19
36
1.82
3929--4092
22
7.3
22
71
13
84
40
10
15
33
1.82
4197--4776
22
26.6
22
69
13
168
39
9
15
36
1.80
4188--4662
44
10.9
44
71
12
252
38
9
15
36
1.80
4761--4883
40
3.3
40
62
23
104
43
7
13
36
1.71
4738--4879
71
2.0
71
100
0
284
43
7
14
35
1.72

Tables:   1

The End!