Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009963.1 Corchorus capsularis cultivar CVL-1 contig09984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31332

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
982--1069
34
2.6
34
91
3
135
13
38
35
12
1.83
1312--1353
14
2.7
15
82
14
50
54
2
26
16
1.54
1471--1523
18
2.8
18
72
16
54
64
1
1
32
1.15
4049--4078
15
1.9
16
93
6
53
80
0
3
16
0.85
4962--4990
3
9.7
3
100
0
58
0
31
0
68
0.89
20964--21006
18
2.4
18
84
3
61
13
13
16
55
1.69
21161--21197
14
2.6
14
91
4
56
0
13
0
86
0.57
27253--27317
28
2.5
26
78
14
71
78
10
3
7
1.06
28707--28733
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!