Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009964.1 Corchorus capsularis cultivar CVL-1 contig09985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30615

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4183--4286
51
2.0
51
100
0
208
51
9
17
21
1.73
4622--4653
2
16.0
2
100
0
64
50
0
0
50
1.00
7372--7413
20
2.1
20
100
0
84
57
0
9
33
1.31
14423--14474
22
2.3
23
93
3
88
48
13
3
34
1.61
15555--15635
42
1.9
42
94
0
144
35
18
20
24
1.95
15687--15728
22
1.9
22
100
0
84
21
16
47
14
1.82
16079--16126
25
1.9
25
100
0
96
31
8
16
43
1.78
19459--19497
10
3.9
10
96
0
69
46
20
2
30
1.64
20754--20782
4
7.2
4
100
0
58
51
0
0
48
1.00
20993--21034
21
2.0
21
100
0
84
38
23
19
19
1.93
23769--24273
255
2.0
255
89
3
773
44
10
12
33
1.75
24628--24669
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!