Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009969.1 Corchorus capsularis cultivar CVL-1 contig09990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43750

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415--461
23
2.0
23
100
0
94
36
12
25
25
1.92
3634--3689
28
2.0
28
100
0
112
32
10
14
42
1.80
7109--7202
47
2.0
47
100
0
188
29
27
21
21
1.98
12485--12558
29
2.6
29
91
4
114
31
9
14
44
1.77
21710--21739
2
15.0
2
100
0
60
50
0
0
50
1.00
24878--24939
33
2.0
30
84
12
81
46
9
17
25
1.79
30499--30582
30
2.9
28
76
15
91
29
25
15
29
1.96
40117--40181
21
3.2
19
73
18
60
69
1
26
3
1.12

Tables:   1

The End!