Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009970.1 Corchorus capsularis cultivar CVL-1 contig09991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20651

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
549--575
13
2.1
13
100
0
54
51
14
33
0
1.43
3541--3606
31
2.1
31
85
0
87
33
12
21
33
1.90
3889--4052
60
2.7
60
85
3
233
34
17
19
28
1.95
3949--4080
31
4.3
31
76
11
137
37
18
18
25
1.93
3920--4020
29
3.4
29
66
15
80
32
19
19
27
1.97
4114--4272
60
2.7
60
90
3
243
25
19
19
35
1.95
4114--4276
29
5.5
29
66
20
104
25
19
19
34
1.96
4652--4693
20
2.2
19
86
4
57
57
2
7
33
1.39
8361--8388
13
2.2
13
100
0
56
39
14
0
46
1.44
11354--11385
1
32.0
1
100
0
64
100
0
0
0
0.00
13770--13844
40
2.0
37
87
12
109
44
5
10
40
1.62

Tables:   1

The End!