Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009973.1 Corchorus capsularis cultivar CVL-1 contig09994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35915

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--73
2
17.5
2
100
0
70
48
0
0
51
1.00
799--832
2
17.0
2
88
11
52
50
2
0
47
1.16
11241--11380
76
1.9
76
84
4
194
47
22
7
21
1.76
19140--19262
58
2.2
55
80
8
147
26
20
19
34
1.96
22205--22231
3
9.0
3
100
0
54
33
33
0
33
1.58
28944--28976
12
2.8
12
86
4
50
6
24
0
69
1.10
29314--29339
2
13.0
2
100
0
52
50
0
0
50
1.00
31105--31205
37
2.6
39
83
15
145
46
6
5
40
1.55

Tables:   1

The End!