Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009982.1 Corchorus capsularis cultivar CVL-1 contig10003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24586

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4369--4436
33
2.0
33
82
2
82
51
7
11
29
1.65
6876--6956
25
3.2
25
62
19
58
27
19
7
45
1.77
6810--6962
52
3.0
51
90
1
227
27
18
10
43
1.83
6901--7154
64
4.0
64
94
0
427
24
18
13
44
1.85
7130--7209
26
3.1
26
62
16
67
23
18
12
45
1.84
7098--7257
51
3.1
51
96
2
286
23
17
12
46
1.82
7160--7194
18
1.9
18
88
0
52
25
14
5
54
1.62
7030--7501
167
2.8
167
86
7
637
23
17
12
45
1.83
7212--7246
18
1.9
18
88
11
54
25
14
5
54
1.62
7196--7321
64
2.0
65
88
4
193
24
18
14
42
1.87
7261--7372
51
2.2
51
93
0
188
24
16
14
44
1.85
7145--7436
115
2.5
115
91
1
478
23
17
13
44
1.84
6850--7519
244
2.8
231
82
12
713
23
18
13
44
1.84
7312--7519
64
3.2
63
89
5
310
23
17
14
44
1.86
7883--7958
27
2.8
27
87
0
116
19
18
25
36
1.94
9618--9692
30
2.5
30
84
6
89
37
13
18
30
1.89
10618--10690
26
2.8
26
85
8
96
19
16
26
38
1.92
11351--11396
23
2.0
23
91
0
74
32
32
10
23
1.90
21244--21319
28
2.8
26
84
9
98
15
15
22
46
1.84

Tables:   1

The End!