Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009986.1 Corchorus capsularis cultivar CVL-1 contig10007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21132

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55--121
34
2.0
33
91
5
109
47
7
11
32
1.68
3138--3283
41
3.6
41
87
5
224
31
15
17
36
1.90
3660--3699
13
3.1
13
85
0
53
25
15
15
45
1.84
4088--4143
19
3.0
19
72
15
62
41
10
5
42
1.62
4280--4366
24
3.7
24
84
3
113
13
34
31
20
1.92
4417--4546
32
4.1
32
88
2
199
20
20
24
35
1.96
4911--4949
6
6.5
6
93
0
69
20
64
15
0
1.30
6968--7055
27
3.3
27
90
0
140
19
18
42
20
1.90
7082--7136
24
2.3
24
96
0
101
16
25
25
32
1.96
8526--8551
13
2.0
13
100
0
52
61
0
38
0
0.96
8601--8662
28
2.3
27
91
8
101
37
11
46
4
1.61
21063--21126
2
33.0
2
77
12
62
42
1
1
54
1.19

Tables:   1

The End!