Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009989.1 Corchorus capsularis cultivar CVL-1 contig10010, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29984

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3540--3573
16
2.1
17
88
5
52
47
2
14
35
1.60
3873--3918
21
2.2
21
88
0
65
17
28
43
10
1.82
6187--6235
21
2.3
21
82
6
55
14
28
16
40
1.87
9120--9163
22
2.1
20
83
8
52
59
15
11
13
1.62
9360--9412
23
2.3
23
93
0
97
20
43
24
11
1.85
17005--17056
24
2.2
24
96
0
95
28
21
13
36
1.91
19051--19286
33
6.9
33
79
8
276
29
21
6
42
1.77
19051--19286
69
3.4
69
92
1
395
29
21
6
42
1.77
19309--19768
39
12.2
39
88
6
659
25
21
8
45
1.79
19309--19767
74
6.1
74
89
6
649
25
21
8
44
1.79
19309--19768
113
4.1
113
87
8
670
25
21
8
45
1.79
19773--19940
40
4.2
40
96
0
300
23
13
10
52
1.70
23432--23482
27
1.9
26
92
4
84
49
23
13
13
1.78
28563--28615
21
2.5
22
78
9
65
16
30
39
13
1.87

Tables:   1

The End!