Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009990.1 Corchorus capsularis cultivar CVL-1 contig10011, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32223

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7725--7771
20
2.3
20
85
0
67
17
8
8
65
1.44
7937--8228
22
13.5
22
75
6
220
26
22
24
26
2.00
8053--8125
38
1.9
38
91
0
119
26
21
26
26
2.00
8028--8214
60
3.0
60
76
8
167
26
25
24
23
2.00
8006--8169
82
2.0
82
82
0
202
25
23
26
24
2.00
8112--8219
45
2.4
45
84
1
137
26
27
21
24
1.99
9476--9582
33
3.2
33
81
7
112
21
39
28
10
1.86
9558--9620
33
1.9
33
96
0
117
22
42
25
9
1.83
9476--9616
66
2.1
66
80
5
151
21
40
27
10
1.86
12713--12787
33
2.3
33
86
4
98
20
44
26
9
1.81
18170--18206
14
2.6
14
86
0
56
54
18
13
13
1.71
18202--19152
35
26.8
35
79
11
718
44
10
18
26
1.82
18203--18966
35
21.3
36
82
7
719
45
11
17
26
1.81
19019--19152
71
1.9
71
84
1
178
44
5
20
29
1.75
18986--19152
36
4.8
36
84
3
182
42
7
21
28
1.79
22530--22563
16
2.2
16
89
5
52
58
8
2
29
1.43
23844--23879
19
1.9
18
88
5
54
33
22
2
41
1.68
24043--24081
20
1.9
21
89
5
62
56
0
20
23
1.42
24043--24082
21
1.9
21
85
10
55
57
0
20
22
1.41
26463--26524
33
1.9
32
90
3
97
20
20
20
37
1.95

Tables:   1

The End!