Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009993.1 Corchorus capsularis cultivar CVL-1 contig10014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50114

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2845--2928
42
2.0
42
86
4
116
46
7
5
40
1.56
6037--6065
12
2.3
13
94
5
51
3
17
0
79
0.87
45601--45704
22
4.7
22
74
8
77
33
18
8
39
1.81
45725--45835
44
2.5
45
79
2
127
30
14
11
43
1.81
45731--45872
66
2.2
66
81
10
157
33
11
11
43
1.77
45727--45893
22
7.7
21
73
8
95
31
11
11
45
1.76
48852--49467
35
17.7
35
89
1
909
32
18
11
37
1.86
49996--50080
30
2.7
31
85
7
109
41
12
3
42
1.60

Tables:   1

The End!