Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009995.1 Corchorus capsularis cultivar CVL-1 contig10016, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10288

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3342--3384
15
2.9
15
96
0
77
6
27
23
41
1.80
4405--4444
19
2.2
18
86
8
55
22
15
7
55
1.65
4758--4788
6
5.3
6
96
3
55
51
12
0
35
1.40
7233--7269
19
2.0
18
94
5
65
0
21
0
78
0.75
7265--7298
9
3.9
9
84
7
52
17
0
0
82
0.67
7234--7295
20
3.2
19
82
8
63
8
11
0
80
0.90
7569--7603
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!