Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000001.1 Corchorus olitorius cultivar O-4 contig00001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1642

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
251--359
53
2.1
53
81
6
123
48
2
12
35
1.56
471--535
21
3.1
20
76
12
60
47
9
6
36
1.60
561--608
23
2.1
23
88
0
69
60
4
6
29
1.40
999--1038
21
2.0
20
85
9
55
52
5
2
40
1.37

Tables:   1

The End!