Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010003.1 Corchorus olitorius cultivar O-4 contig10035, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11647

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
610--683
24
3.1
24
75
7
87
25
22
24
27
2.00
659--836
12
14.8
12
72
12
77
28
23
22
26
1.99
635--851
36
5.7
36
77
14
211
28
22
22
26
1.99
611--761
48
3.1
48
86
3
180
26
23
22
27
1.99
609--848
84
3.0
84
85
10
324
27
22
22
26
1.99
671--872
48
4.2
48
85
2
185
28
22
22
26
1.99
707--872
72
2.3
72
92
0
278
27
22
23
25
2.00
653--849
18
11.3
18
72
12
135
27
22
23
25
2.00
707--872
36
4.6
36
84
5
210
27
22
23
25
2.00
2835--2864
1
30.0
1
100
0
60
0
0
0
100
0.00
6406--6532
2
69.5
2
72
25
77
40
1
4
52
1.32
6406--6522
36
3.2
35
76
11
119
40
1
5
52
1.33
7077--7118
19
2.3
18
81
18
52
35
0
2
61
1.09

Tables:   1

The End!