Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010024.1 Corchorus olitorius cultivar O-4 contig10056, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2218

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
669--1041
81
4.6
80
81
6
306
32
14
17
34
1.91
819--1021
83
2.5
80
84
6
230
30
18
19
31
1.96
917--1178
135
1.9
135
84
4
350
30
22
15
31
1.95
1050--1672
81
7.6
81
80
2
656
28
20
19
31
1.97
837--1259
216
1.9
217
81
5
507
30
21
17
31
1.96
1053--1675
161
3.8
162
81
2
665
28
20
19
31
1.97
1056--1675
242
2.5
247
81
2
721
28
20
19
31
1.97
1688--1883
81
2.4
81
83
0
239
29
18
19
33
1.95
1989--2091
54
1.9
54
90
4
163
29
25
8
36
1.86

Tables:   1

The End!