Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010026.1 Corchorus olitorius cultivar O-4 contig10058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22702

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9985--10016
12
2.5
13
90
10
57
43
0
18
37
1.51
15710--15751
20
2.1
20
91
8
68
45
19
2
33
1.63
15713--15751
18
2.1
18
85
9
51
46
17
2
33
1.62
19208--19357
69
2.2
69
95
1
266
17
14
18
49
1.80
20134--20182
18
2.7
18
84
9
64
59
2
4
34
1.28
21186--21234
24
2.0
24
100
0
98
48
4
20
26
1.67
21855--21908
27
2.0
27
88
0
81
7
20
14
57
1.61
22644--22691
15
3.1
15
80
14
53
52
2
4
41
1.32

Tables:   1

The End!