Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010027.1 Corchorus olitorius cultivar O-4 contig10059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1811

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
362--774
35
11.6
35
77
5
324
19
22
17
39
1.92
837--978
36
4.0
36
88
5
189
19
19
16
45
1.86
801--905
31
3.2
31
77
12
93
19
16
20
44
1.86
837--978
71
2.0
71
84
4
187
19
19
16
45
1.86
383--972
35
16.7
36
75
8
205
19
20
18
41
1.90
1196--1749
30
18.5
30
90
0
759
17
13
19
49
1.79

Tables:   1

The End!