Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010044.1 Corchorus olitorius cultivar O-4 contig10076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6469

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
617--685
26
2.6
27
83
2
86
17
14
24
43
1.86
3295--3431
50
2.7
50
85
3
159
41
7
14
36
1.74
3319--3432
50
2.3
49
87
4
174
39
7
16
35
1.78
3438--3637
50
4.0
51
75
8
160
42
4
15
39
1.65
4597--4815
43
4.8
44
78
14
201
22
30
15
31
1.95
4597--4823
93
2.5
92
88
2
330
22
30
15
31
1.95
4831--5112
41
7.0
40
79
5
298
15
25
20
37
1.93
4839--5112
81
3.4
81
89
2
381
15
25
21
37
1.92

Tables:   1

The End!